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MMseqs2

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HEALTH SCORE
Healthy*
Partial score (2/3 categories)
52out of 65

Solid maintainer coverage. Development cadence keeps the score from reaching Excellent. Security & Supply Chain is unavailable, so weights were redistributed.

LIFECYCLE
Active

Consistent commits, responsive maintainers, regular releases, and healthy issue triage.

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Health breakdown

Maintainer availability, known risks and supply chain posture, and whether the project is actively developed or appropriately stable.

Maintainer responsiveness

Median response time is 1 day.

Bus factor

5 active maintainers currently have merge rights.

Organization Diversity

Contributors span 59 organizations.

Project Achievements

Leaderboards
About
MMseqs2 (Many-against-Many sequence searching) is a high-performance software suite for protein sequence searching and clustering. It enables ultra-fast sequence searches and profile searches through sequence prefiltering, reduced amino acid alphabets, and parallelized processing, making it significantly faster than traditional tools while maintaining high sensitivity.
First commit
Software value
$15M
Tags
alignment
bioinformatics
blast
linclust
metagenomics
mmseqs
profile-search
sequence-clustering
sequence-search
taxonomy
License(s)
MIT

Data sources

Git Git
GitHub GitHub