10 projects
MNE-Python
MNE: Magnetoencephalography (MEG) and Electroencephalography (EEG) in Python
Contributors
1,833
Organizations
271
Software value
$11M
NIPYPE
NIPYPE is a Python-based neuroimaging data processing framework that provides a uniform interface to existing neuroimaging software and facilitates interaction between these packages within a single workflow. It enables reproducible, distributed analysis of neuroimaging data through workflows and interfaces to commonly used neuroimaging tools.
Contributors
1,037
Organizations
191
Software value
$7.2M
3D Slicer
3D Slicer is an open-source software platform for medical image informatics, image processing, and three-dimensional visualization. It supports multi-modality imaging including MRI, CT, US, nuclear medicine, and microscopy. The platform provides advanced features for image analysis, visualization, registration, segmentation, and enables the development of custom modules and extensions.
Contributors
792
Organizations
91
Software value
$20M
ANTs
Advanced Normalization Tools (ANTs)
Contributors
788
Organizations
101
Software value
$5.4M
C-PAC
Configurable Pipeline for the Analysis of Connectomes
Contributors
434
Organizations
73
Software value
$5.7M
Spinal Cord Toolbox
Spinal Cord Toolbox (SCT) is a comprehensive software library for processing and analyzing MRI data of the spinal cord. It provides automated tools for segmentation, registration, motion correction, and extraction of various metrics from spinal cord MRI data.
Contributors
336
Organizations
49
Software value
$1.5M
AFNI (Analysis of Functional NeuroImages)
Official AFNI source and documentation
Contributors
225
Organizations
45
Software value
$65M
Scilpy
Scilpy is a Python library for diffusion MRI analysis and tractography processing, providing tools and utilities for medical image processing, fiber tracking, and brain connectivity analysis
Contributors
148
Organizations
11
Software value
$2.1M
CBRAIN
CBRAIN is a flexible Ruby on Rails framework for accessing and processing of large data on high-performance computing infrastructures.
Contributors
104
Organizations
11
Software value
$5.2M